CDS

Accession Number TCMCG016C10572
gbkey CDS
Protein Id OMO83626.1
Location join(10190..11440,13893..13930,15744..15962,16067..16269,16358..16458,16578..16622,17150..17204,17954..18009,18119..18205,18343..18441,18538..18646,18869..18960,19047..19184,19266..19361,19471..19595,19696..19828,19926..20051,20161..20266,20373..20684,21327..21397,21911..21958,22716..22772)
Organism Corchorus capsularis
locus_tag CCACVL1_11313

Protein

Length 1188aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009851.1
Definition hypothetical protein CCACVL1_11313 [Corchorus capsularis]
Locus_tag CCACVL1_11313

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription initiation factor TFIID subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03131        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000123        [VIEW IN EMBL-EBI]
GO:0000124        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005669        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006367        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006473        [VIEW IN EMBL-EBI]
GO:0006475        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016573        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0018393        [VIEW IN EMBL-EBI]
GO:0018394        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031248        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043543        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070461        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902493        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGAAAAATCAGCAGGCCAAACTTCAGCCGAGACAATAGCTTCTAACCAAGATTTATTACAGGAAATCCTCGTACGTTTGCCTGTAAAATCTGTTCTTAAATCCAAACTTGTCTCTAAATCATGGCTTTCTCTCTTATCAGATCCTCGTCTTGCTGTCAAACATACTCGGCTGCATGTCAATCTTGGACCCTCCGGCCTCTACTTTTATGGCAGCCCCCATGGTTTCCTCAACTTTGACACAAATCCGACCAATCTTAAGGTACCATCTCTCACTTTTCTCGACATTAAAGGCCTTGAAATTCTTCAATCTTGCAATGGGTTGTTGCTTCTTCTCTGTCAGATTGATTCTGAAGACAGTTACTCTGGTTTAACTTACCGTGTCTGTAATCCCACTACCAAGAACTTCGTTACTGTTCCTCTTCCTAATCCAACTGCAAAAAGGTCAATAGCAGGAATGAATTTGGCTTTTGATCCATCAAAATCCACTCATTATAAAGTCATTTGTGTCTTGCTGAATAACACGCATGACCCAATTATAGATGAAACTTGTAATAAATTTCTTGGATTAATTGAAGGTGTGGGTAACATTGAACACCCCATTTCTCCTACTTATCAGATTGAGATCTTTTCATCAGAAACTAAAGCTTGGGAATTCTGTGGAGGCCCTTTTGAAGCACCCCATTATACAGATTTTGAGCATGCAGTGTTTTGGAATGGTTCAATTCATTGGCTTAGTCCTACGGATGTTTCTCTTTACTTTGATGTTGAGACAGAAACCTTAAAAACTATGGCCATGCCTCGGAATCAGGCAGGAACAAATGGTTTCTGGAGCTCTCAAAGGTTTCCTTACTTGGGAGAATGTCGTGGCCATTTGCATCTTATTGAAGTTGACTCAATCAGCACACCTACATTTTGTGTATTCGAGATGAAGCCTGATCACTCTGGTTGGTTTGTGAGATACATAATCGATCTCGAAAACATTGCACTTAATTTCCCTGAGATTGGTCGGAGGTATATCGATGAGTTCCCGAATTTGGCACAGAACAATGAAGAGGATTTCCGAGTTCAGTATTATGCCTACTCTATACTGAGTGTTGTTAGAGGAGAGGAAGAGGATGATGTGGAATTGGTGCTGCTGATACCAGGCAAAATCGTCTCTTACAATCCTAAACTAAACACTTTAAAGCTGCTTTCAAGCTGGAGATCCAACAGTGTTTATGATTGCATGAAATACAGATGGTACCAGAAGGTCTGGTACTCGCCATTGTTGAATAACAGCCAAGGGTCGATGGCATCTTCTTCAGACCCATGGATAAAAGAATATAATGAAGCGGTGAAAATTGCAGATGATATTAATGGCATGATATCTGAAAGGACTTCCTTGCCTGCATCAGGACCAGAAACCCAACGTCATGCTTCTGCCATAAGAAGGAAGATTACTATTTTAGGGACTAGACTTGATGGATTGCAGTCTCTATTGTCTAGACCTACCGGGAAGCCATTAACGGAGAAAGAGATGAATCGTCGAAAGGACATGGTTGCAAATTTGAGATCAAAAGCAAACCAGATGGCTTCTGCATTCAATATGTCAAACTTTGCTAACAGAGACAGCCTGTTAGGGCCGGAAATTAAGCCAGATGCCATGAGTAGAACAGTTGGTTTGGATAACTCTGGCCTTGTTGGTCTTCAACGACAAATAATGAAAGAGCAAGATGAGGGTCTTGAGAAGTTGGAGGAGACGGTATCAAGTACAAAGCATATTGCATTGGCAGTGAATGAAGAACTTGATCTCCATACCAGACTCATTGATGACCTGGATCAGCATGTGGATGTTACCGATTCTCGCCTACGGAGAGTGCAGAAAAACCTGGCCATATTGAACAAGCGTACCAAAGGTGGTTGTTCCTATGTCGCCCTTGCTCTTGCTCCTGATGTTGAATATCGTGTTCGCGAGATTATGCAAGAGGCGATTAAATGCATGCGCCACTCACGGCGGACTCTTTTGACGGCTGAGGACGTCGACAGTGCTCTTAAACTGAGAAATGTGGAGCCGATATATGGCTTCACCTCCCGTGATCCACGGTTCAAAAGAGCTGCTGCAGATAAAGGTTTATTCTACATTGATGATAAAGATGTGGAATTTAAAGAAGTTATTGAATCTCCTTTACCAAAAGCGCCCCTTGATACATCGGTTACTGCTCACTGGCTAGCAATTGAAGGCATTCAGCCTGCAATTCCAGAAAATGCTTCTGTTGAAGCACCTCCTGATGGGAAAAAGGCCGAGTACAAGGAAGATGGACTTTCAGATAATAGATTATCTATTAAGCATGTTTTGCCTCGAGAACTTCAGCTCTACTTTGACAAAGTCGTGGAGCTTACTATGAAGAGACCGGTTTCCGTGGTCTTTAAACAAGCGTTATTGAGCTTGGCAACAGATTCAGGACTCCATCCTTTAGTTCCTTATTTTACATGTTTCATTGCTGATGAGGTTGCGCGGAATTTGAATCATCTTCCTCTCACATTTGCATTGATGCGTGTTGCCCGGAGTCTTCTTCACAATGAACACATACACATTGAACCTTATTTACACCAATTGATGCCATCTGTTATTACCTGCCTTGTTGCAAAGAGATTAGGGAATAAATTTACAGATAATCACTGGGAACTTAGAAACTTCGCAGCAAAGCTGCTGGCATCAATATGCAAAAGATTTGGGCATGTTTATCACAACCTTCAGCCACGTGTAACGAGGACTCTGCTCCATGCTTTTTTGGATCCAACAAAAACATTGCCTCAACATTATGGTGCAATTCGAGGGTTAGCAGCCCTTGGACCTAGTGTGGTTCGTCTACTTATACTACCAAATCTCGAGGCATATTTGCAACTTCTCGAACCAGAAATGCTACCTGAGAAGCAGAAGAATGAAATCAGAAGGCATGAAGCTTGGTGCGTTCATGGTGCATTGCTGCGTGCGGCTGGGCTGTGCATGTATGATCGGCTTAAAATGTTCCCCAGTCTACTAGCTACCCCAGCCCGTCCTGTCTGGAAAAGCAGTGGAAAAGTCGTGACAACAAATAAACGCAAAGCAAGCACAGACAACTTGATGCAGCAACCACCAGTCAAGAAAATAGCCAGTGACGGTGCAATTGGTATGATGCCAATAAATTCCATGCAAGTTGATATGCAAGGAGCAGTTGGTGGCTTTTCTACCGGTATAGGAGGTCCCAATATGGGTGTATCATCAATATCGCGGCAGTTATCGAACGATCACATATCAGGTAGGGAGGTCAGCGGTCGAGGTTTGAAGACTTCAAGTGTTCTAGCTCAGGCTTGGAAGGAGGACACTGATGCAGGGAACTTGCTAGCATCACTGTTCGAGCTTTTCGGAAATTTGTGCTTAATCGAGATCTGGACTATGGGTTTCTTGATAACGACCCTAATTTTTGCTGTGATTGGGGTTCCACTTAACATTGGTCATTACCGCAACAGTCTGTTGTTGGATGATGTGGGCAATCGTATATCTTGCACAAATGAAACCGCTCATTGTCCCCATTTTGAGTGA
Protein:  
MSEKSAGQTSAETIASNQDLLQEILVRLPVKSVLKSKLVSKSWLSLLSDPRLAVKHTRLHVNLGPSGLYFYGSPHGFLNFDTNPTNLKVPSLTFLDIKGLEILQSCNGLLLLLCQIDSEDSYSGLTYRVCNPTTKNFVTVPLPNPTAKRSIAGMNLAFDPSKSTHYKVICVLLNNTHDPIIDETCNKFLGLIEGVGNIEHPISPTYQIEIFSSETKAWEFCGGPFEAPHYTDFEHAVFWNGSIHWLSPTDVSLYFDVETETLKTMAMPRNQAGTNGFWSSQRFPYLGECRGHLHLIEVDSISTPTFCVFEMKPDHSGWFVRYIIDLENIALNFPEIGRRYIDEFPNLAQNNEEDFRVQYYAYSILSVVRGEEEDDVELVLLIPGKIVSYNPKLNTLKLLSSWRSNSVYDCMKYRWYQKVWYSPLLNNSQGSMASSSDPWIKEYNEAVKIADDINGMISERTSLPASGPETQRHASAIRRKITILGTRLDGLQSLLSRPTGKPLTEKEMNRRKDMVANLRSKANQMASAFNMSNFANRDSLLGPEIKPDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVSSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSYVALALAPDVEYRVREIMQEAIKCMRHSRRTLLTAEDVDSALKLRNVEPIYGFTSRDPRFKRAAADKGLFYIDDKDVEFKEVIESPLPKAPLDTSVTAHWLAIEGIQPAIPENASVEAPPDGKKAEYKEDGLSDNRLSIKHVLPRELQLYFDKVVELTMKRPVSVVFKQALLSLATDSGLHPLVPYFTCFIADEVARNLNHLPLTFALMRVARSLLHNEHIHIEPYLHQLMPSVITCLVAKRLGNKFTDNHWELRNFAAKLLASICKRFGHVYHNLQPRVTRTLLHAFLDPTKTLPQHYGAIRGLAALGPSVVRLLILPNLEAYLQLLEPEMLPEKQKNEIRRHEAWCVHGALLRAAGLCMYDRLKMFPSLLATPARPVWKSSGKVVTTNKRKASTDNLMQQPPVKKIASDGAIGMMPINSMQVDMQGAVGGFSTGIGGPNMGVSSISRQLSNDHISGREVSGRGLKTSSVLAQAWKEDTDAGNLLASLFELFGNLCLIEIWTMGFLITTLIFAVIGVPLNIGHYRNSLLLDDVGNRISCTNETAHCPHFE